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Tumor hypoxia as a driving force in genetic instability
Genome Integrityvolume 4, Article number: 5 (2013)
Sub-regions of hypoxia exist within all tumors and the presence of intratumoral hypoxia has an adverse impact on patient prognosis. Tumor hypoxia can increase metastatic capacity and lead to resistance to chemotherapy and radiotherapy. Hypoxia also leads to altered transcription and translation of a number of DNA damage response and repair genes. This can lead to inhibition of recombination-mediated repair of DNA double-strand breaks. Hypoxia can also increase the rate of mutation. Therefore, tumor cell adaptation to the hypoxic microenvironment can drive genetic instability and malignant progression. In this review, we focus on hypoxia-mediated genetic instability in the context of aberrant DNA damage signaling and DNA repair. Additionally, we discuss potential therapeutic approaches to specifically target repair-deficient hypoxic tumor cells.
The tumor microenvironment is characterized by sub-regions of nutrient deprivation, low extracellular pH, high interstitial fluid pressure, and hypoxia. Hypoxic areas arise when oxygen consumption exceeds that of supply . In normal tissues, the oxygen supply matches the metabolic requirements of the cells. However, in locally advanced solid tumors, the oxygen consumption increases significantly, resulting in inadequate oxygen supply to some regions of the tumor. In addition, the blood vessels within a tumor microenvironment are usually chaotic, dilated and irregularly organized . In normal tissues, the oxygen tension (pO2) ranges from 10 to 80 mmHg (or 1.25% to 10% O2). However, tumors often contain regions where the oxygen concentration can significantly decrease to less than 5 mmHg (or < 0.6% O2) [2, 3]. Clinical studies using pO2 electrodes, hypoxia imaging (positron emission tomography (PET)), and immunohistochemistry (IHC) have demonstrated that hypoxia is a characteristic of all solid tumors . Hypoxic regions within tumors can be measured by IHC assessment of intrinsic and extrinsic hypoxic cell biomarkers. Intrinsic biomarkers of hypoxic response include hypoxia inducible factor 1 (HIF1α), vascular endothelial growth factor (VEGF), carbonic anhydrase IX (CAIX), osteopontin and glucose transporters 1 and 3 (GLUT1, GLUT3) and the extrinsic biomarkers include drugs that specifically accumulate or become bio-reduced to form adducts within hypoxic cells such as pimonidazole (PIMO), EF5 and CCI-103 F . Increased levels of hypoxia correlates with genetic instability, tumor progression, local and systemic resistance; all leading to poor clinical outcome following treatment [6–12].
Tumor cells that lie beyond the diffusion distance for oxygen (> 70 μm away from blood vessels) can quickly outstrip blood supply and are exposed to chronically low oxygen tensions . These diffusion-limited conditions for duration of days are referred to as “prolonged” or “chronic hypoxia” . The cells in these regions are believed to remain hypoxic until they die (due to lack of oxygen or nutrients) or are reoxygenated . Hypoxia can also be transient or “cycling” due to acute perfusion changes in the tumor vasculature. The blood vessels formed during unregulated angiogenesis contain severe structural and functional abnormalities and can temporarily close and re-open, leading to cycles of acute hypoxia/anoxia (from minutes to hours) followed by reoxygenation (hence, cycling hypoxia) . Both acute and chronic hypoxia co-exist within a tumor resulting in significant gradients of oxygen consumption leading to intratumor heterogeneity .
In an experimental setting, cellular hypoxia can be induced by placing cultured tumor cells in complete media in environmentally-controlled chambers in which oxygen levels in the gas phase are maintained at 0.01-3% . These hypoxic conditions may not be lethal nor growth inhibitory to selected tumor cell lines when cultured in the presence of excess glucose and nutrients. However, when cells are placed in the complete absence of oxygen (anoxia), most cells will stop proliferating due to the activation of anoxia-mediated intra-S phase arrest mediated by the ataxia telangiectasia mutated (ATM) and ataxia telangiectasia and RAD3-related (ATR) kinases [18–21]. If prolonged, this arrest of DNA replication becomes irreversible leading to cell death mechanisms . Hence, a permanent anoxic microenvironment (e.g. close to 0% O2) eventually leads to cell death whereas tumor cells that exist in hypoxic microenvironments (e.g. 0.2 to 1% O2) could adapt and continue to proliferate with altered biology [12, 14]. Tumor cells that adapt to low oxygen conditions gain an overall advantage for growth and leads to treatment resistance following chemotherapy or radiotherapy . Therefore, the study of proliferating hypoxic cells is important as it represents a clinically-challenging, sub-population of resistant cells with the potential of clonal expansion and metastatic spread.
Clinical observations, supported by pre-clinical data, have demonstrated that hypoxia is associated with an increased capacity for metastasis . Metastasis is a multi-step process that involves disruption of cell adhesion to the neighboring cells and to the basement membrane, migration through the extracellular matrix, penetration of vessel walls and circulation exit, and finally initiation of angiogenesis to allow tumor growth in the target tissue . Hypoxia can lead to altered expression of many proteins involved in this process by regulating the expression of E-cadherin (cell-cell contact), urokinase-type plasminogen activator receptor (uPAR; degradation of extracellular matrix proteins), hepatocycte growth factor (HGF; cellular motility) and vascular endothelial growth factor (VEGF; angiogenesis and vascular permeability) [14, 24, 25]. Hypoxia also limits the effectiveness of many anti-cancer therapies. The efficiency of ionizing radiation to create lethal DNA breaks is strongly associated with oxygen tension and creation of free radicals. Oxygen can react with the damaged DNA bases created by free radicals to yield a more stable adduct and this reaction chemically “fixes” the damage . Indeed, oxygenated cells can be two to three times more sensitive to radiation than hypoxic or anoxic cells [12, 26]. However, ionizing radiation under anoxic conditions has been shown to increase the levels of DNA-protein crosslinks [27, 28]. Moreover, poor drug distribution and decreased proliferation can decrease the efficacy of many chemotherapy drugs [12, 14]. Thus, the cells in hypoxic regions can adapt to become resistant to radiotherapy and chemotherapy and ongoing selection of increasing aggressiveness . Therefore, two main clinical entities are associated with hypoxic tumors: increased local tumor cell resistance and development of systemic metastasis. Despite these data, hypoxia-targeted therapy is still not a standard of current cancer treatments . Therefore, the study of hypoxic cells is important in order to gain a further understanding of the consequences of the hypoxic microenvironment for the development of genetic instability as a precursor to tumor progression and therapy-associated resistance.
Hypoxia-mediated genetic instability
Tumor cells can acquire multiple adaptations in the selective pressure of the tumor microenvironment. Hypoxia inducible factor 1α (HIF1α) is a transcription factor, which is kept at low levels in the presence of oxygen by von Hippel-Lindau protein (VHL)-mediated degradation . In hypoxic conditions, HIF1α is quickly stabilized and regulates a number of genes including those involved in vascularization, glycolysis and pH homeostasis . HIF1α is crucial for hypoxic adaptation, and overexpression of HIF1α is associated with a poor disease outcome . Loss of HIF1α control can promote the malignant phenotype and genomic instability via interplay with oncoproteins such as c-MYC [33–37]. Oncogene amplification, DNA replication stress, and deregulated DNA damage checkpoint signaling in hypoxic tumor cells, together with the ability to escape cell death, can allow cells to proliferate in the presence of damaged DNA and acquire further mutations [38, 39]. The vicious cycle is accelerated by increased frequency of mutations and by the ability of hypoxic cells to downregulate DNA repair; therefore further driving genomic instability (see Figure 1) [14, 40]. Moreover, when hypoxic cells become reoxygenated, they may acquire further DNA damage as a result of a sudden burst of free radicals [41, 42]. We now discuss further hypoxia-mediated genomic instability in the context of the DNA damage signaling and inhibited DNA repair.
Hypoxia and the DNA Damage Response (DDR): checkpoints and DNA replication
Human cells maintain genetic integrity by detecting DNA damage and activating cell cycle checkpoints and DNA repair pathways . The G1/S, intra-S, and the G2/M checkpoints, are mediated by ATM/ATR and checkpoint kinases 2 and 1 (CHK2)/(CHK1), respectively [18–21, 43]. These kinases transmit signals to the effector molecules p53, p21 (G1/S) and CDC25 (G1/S, intra-S and G2/M) to prevent cell cycle progression or to initiate programmed cell death [44, 45]. Cycles of hypoxia followed by reoxygenation in tumors cyclically activates many DNA damage response (DDR) proteins. Furthermore, ATM, DNA-PKcs, H2AX, p53, CHK1, CHK2, 53BP1 and NBS1 are phosphorylated under conditions of severe hypoxia (<0.02%) in the absence of exogenous DNA damage [18, 41, 46–51]. Anoxia therefore leads to cell cycle arrests at G1 and intra-S in the absence of DNA damage, and in turn, reoxygenation causes CHK2-mediated G2 arrest [12, 19, 21, 22, 38, 52]. When an arrested hypoxic cell becomes reoxygenated, it may either resume proliferation or undergo an irreversible loss of DNA replication ability and undergo cell death [38, 53–55]. The length of the hypoxic stress may determine the ultimate fate of a cancer cell . Cell cycle changes however depend on the level of hypoxia. For example, oxygen levels such as 0.2% do not activate ATM or ATR and cell cycle checkpoint signaling . Propagation of such a tumor cell with potentially altered DNA damage signaling and reoxygenation-induced DNA damage, can contribute to genetic instability and malignant progression .
HIF1α can also bind directly to minichromosome maintenance (MCM) proteins that are responsible for unwinding the DNA during replication . Direct interaction between HIF1α and MCM7 results in increased prolyl hydroxylation-dependent HIF1α degradation, and an interaction with MCM3 results in HIF1α transactivation domain function inhibition . HIF1α can block replication origin firing and DNA replication by binding to Cdc6, which is involved in recruiting MCM helicases to replication origins. HIF1α-Cdc6 interaction leads to enhanced MCM helicase loading and decreased recruitment of Cdc7 to replication origins, resulting inhibition of replication origin firing and overall DNA replication .
Hypoxia causes microsatellite and chromosomal instability
Studies have also documented an increased rate of spontaneous DNA mutations in cells exposed to hypoxia using reporter assays. This further supports the view of tumor microenvironment as a driving force of genomic instability (see Table 1) [59–62]. The concept of genetic instability covers a wide variety of genetic alterations from point mutations to chromosomal number. These changes are divided into two types: microsatellite instability (MSI) and chromosomal instability . MSI is typically found in colorectal cancers and is caused by defective DNA mismatch repair (MMR) . As hypoxia downregulates MMR, a model of tumor microenvironment-driven MSI has been proposed. This suggestion is supported by studies both in vitro and in vivo of colorectal cancer models [65–67]. High level of HIF1α associates with MSI in human colorectal carcinoma [68, 69]. Further investigation in clinical settings will show whether the mechanistic laboratory findings of HIF-MMR-MSI can be generalized to other cancers in addition to colon carcinomas.
DNA double-strand break (DSB) repair is crucial for chromosomal integrity. Unrepaired DSBs can lead to formation of deletions, insertions, translocations and amplifications [83, 84]. For example, cells deficient for BRCA1/2 develop spontaneous gross chromosomal aberrations [85–89]. Hypoxia is known to both inhibit DSB repair and to promote chromosomal instability in multiple ways [71, 73, 90]. Fragile sites are specific chromosomal regions prone to chromosomal breakage and rearrangements during replication stress and are induced under hypoxia [73, 91]. This could be, in part, explained by hypoxia-mediated downregulation of DSB repair genes, as RNAi inhibition of DSB repair results in fragile site activation . Additionally, ATM and ATR kinases maintain fragile site stability, and DSB biomarkers γ-H2AX and DNA-PKcsThr2609 foci localize at fragile sites [92, 93]. An unrepaired DSB can also lead to DNA amplification, which has been observed in hypoxic cells [70, 71, 75, 79, 94]. Additionally, the frequency of sister chromatid exchange (SCE), which is in part controlled by homologous recombination (HR) repair, may be increased in hypoxic primary human lymphocytes [81, 95]. Human fibroblasts subjected to continual hypoxic conditions following exogenous DNA damage maintained increased chromosomal aberrations such as chromosome breaks, chromatid breaks, ring chromosomes, telomeric fusions, reciprocal translocations and double minutes . Finally, hypoxia may also induce global deacetylation and methylation of histones, phosphorylation of H2AX and altered condensation states within the chromatin .
In order to prevent mitotic errors leading to genetic instability, the cell must properly align chromosomes during mitosis. The mitotic spindle is generated by the activity of centrosomes, which are composed of centrioles and pericentriolar material . Defects in centrosomes and spindle formation lead to aneuploidy during the process of carcinogenesis and tumor progression [97, 98]. Recently, a study has shown that hypoxia can modify centrosome function by altering the activity of prolyl-4-hydroxylases (PHDs) towards the protein Cep192 (a critical component of the centrosome) . This allows for mediating signaling between oxygen tension and cell cycle control. Further studies are required to investigate whether these and other genes that are involved in mitosis and centrosome organization are altered in cancer cells within hypoxic sub-regions of solid tumors.
Altogether, these studies support the concept that hypoxia can modify fragile sites, the repair of DNA damage, chromatin biology, and possibly mitosis in promoting genetic instability during tumor progression.
Hypoxia-mediated inhibition of DNA repair
The understanding of hypoxia in the context of signaling and DNA repair is increasing based on data using isogenic models that vary in specific DNA repair pathways. Below, we discuss the mechanisms of DNA repair downregulation in hypoxic cells in a pathway-specific manner (Figure 1).
DNA double-strand break repair
Ionizing radiation (IR) or radiomimetic drugs create DSBs, which are mainly repaired by HR or non-homologous end-joining (NHEJ) pathways in a cell cycle-dependent manner . The proteins RAD51, BRCA1/2 and the MRN complex (MRE11, RAD50, NBS1) together regulate HR during S and G2 phases of the cell cycle. Proteins such as KU70/80, DNA-PKcs and DNA-ligase IV function in NHEJ across all phases of the cell cycle .
The majority of HR proteins are repressed by chronic hypoxia . This can occur through decreased transcription, translation, miRNA modulation and epigenetic silencing. The first mechanistic model suggests that HIF1α competes with and opposes MYC activity in hypoxic cells, inhibiting Brca1 and Nbs1 transcription [35, 102–104]. Another model proposes that HR gene expression, including Rad51 and Brca1, is repressed by the E2F-4/p130 complex independent of HIF [105–107]. The HIF-independent mechanism is supported by observations of downregulated RAD51 in isogenic HIF1α−/− mouse embryo fibroblasts (MEFs) under hypoxia, albeit by reduced efficiency . Studies from our laboratory support a third model involving selective inhibition of protein synthesis. Hypoxia alters protein synthesis by pathways that modulate gene expression in both transcript-specific and a global manner; via unfolded protein response (UPR) and mammalian target of rapamycin (mTOR) signaling . Our findings indicate that in chronically hypoxic proliferating cells, RAD51 and BRCA2 are downregulated due to selective inhibition of mRNA translation . Yet another layer to hypoxia-regulated HR expression involves altered chromatin modification and Brca1 promoter silencing in severe hypoxia . Finally, miRNA may play a role in HR suppression and can affect Rad52 gene expression .
The impact of hypoxia and DNA repair on malignant progression is demonstrated in studies indicating that repressed HR is linked with cancer initiating cell formation . Breast tumor-initiating cells overexpress polycomb protein EZH2, which is further induced by HIF1α under hypoxia [112, 113]. EZH2 inhibits Rad51 transcription in hypoxic CD44+CD24-/low cells, which is associated with increased genomic abnormality . This EZH2-RAD51 signaling (via RAF1 amplification) promotes mammosphere formation and malignant progression .
The function of NHEJ in hypoxia-driven genetic instability and radiation response is more controversial. Inhibited expression of DNA-PKcs, Ku70, Ku80 and DNA-ligase IV has been observed under hypoxia [101, 114]. NHEJ factors are downregulated in hypoxic wild-type MEFs and in normoxic HIF1α−/− MEFs . In cervical tumors, KU70/KU80 expression correlates with oxygen pressure and is inhibited with increasing distance to blood vessels . We observed an increase in residual DSBs in G0/G1 synchronized human fibrobalsts under hypoxic conditions following exogenous DNA damage (Figures 2 and 3) . On the other hand, induction of Ku70 may occur under hypoxia in some cell lines . KU70 could indeed contribute to hypoxic tumor cell resistance to radiation, as expression of a dominant negative form of KU70 sensitizes hypoxic glioma and colorectal cells to radiation . Other reports have proposed redundancy or increased NHEJ under hypoxia [118–120]. An outstanding question in the field is whether the MRN complex, ATM and DNA-PKcs kinases differentially sense DSBs under oxia vs hypoxia (Figure 1). Varying model systems and tumor microenvironment conditions might explain the differing observations, and further investigation will clarify the role of hypoxia in NHEJ control.
MMR repairs DNA base substitutions and misalignments, which occur during DNA replication . Mammalian MMR uses proteins such as MutSα (MSH2 + MSH6), MutSβ (MSH2 + MSH3), and MutLα (MLH1 + PMS2) .
The involvement of MMR in the hypoxic response is fairly well characterized. The hypoxia-driven genetic instability in colorectal cancers is consistent with inhibited Mlh1 transcription in low oxygen . Mechanistically, MMR inhibition under hypoxia involves at least MYC and DEC transcription factors. Interplay of HIF1α and MYC has been suggested to regulate MMR expression; MYC-dependent regulation of MSH2 and MSH6 in oxic cells may be replaced by HIF1α under hypoxia [35, 78, 104]. In addition, knockdown of HIF1α reverses hypoxia-driven inhibition of MMR expression [78, 123]. Repression of MMR gene expression by decreased MYC and increased MAX, MAD and MNT association on Mlh1 and Msh2 promoters have been observed in hypoxic cells . MYC, MAD and MNT (as part of the “max network” containing basic helix-loop-helix zipper (bHLHZ) motifs) form heterodimers with MAX resulting in sequence-specific DNA binding . These DNA-bound heterodimers can then alter chromatin structure to modulate transcription . Additionally, hypoxia-induced transcription repressors DEC1 and DEC2 contribute to Mlh1 inhibition . Hypoxic MMR regulation is also influenced by the state of chromatin acetylation [66, 76, 80, 125].
Nucleotide excision repair and Fanconi anemia pathway
Chemicals covalently bound to DNA forming bulky adducts, as well as chemical-caused DNA crosslinks and UV-induced DNA lesions, are repaired by nucleotide excision repair (NER). NER in mammals uses two pathways: global genome repair (GGR) and transcription-coupled repair (TCR) . GGR involves multiple sequential steps including sensing of the lesion (XPC-HR23B-Centrin 2 complex), opening of a denaturation bubble (TFIIH, XPA-RPA complex), incision of damaged strand (XPG, XPF-ERCC1 complex), displacement of lesion-containing oligonucleotides and gap filling (DNA Pol δ and ϵ) and ligation (ligase III, ligase I) . On the other hand, TCR requires CSA, CSB and XAB2 to sense the lesion and proceeds to GGR for the next sequential steps . Both decreased and increased ability of cells to repair UV-damaged DNA in conditions of hypoxia and low pH have been reported [74, 120]. Indication for NER in the hypoxic response comes from findings of XPC and XPD as direct HIF1α targets, and inhibition of HIF1α perturbs the removal of UVB-induced 6–4 photoproducts (6-4PPs) and cyclobutane pyrimidine dimers (CPDs) . Also, HIF1α associates with the gene promoter of CSB/ERCC6, which functions in recruiting NER repair proteins to the damaged DNA, and is induced by hypoxia. CSB mutant cells fail to activate HIF-dependent hypoxic response . Finally, RAD23B protein is repressed under hypoxia and by miRNA-373 . Further investigation is needed to establish the role of hypoxia in NER.
Fanconi anemia (FA) is a hereditary disorder with predisposition to cancer . The FA pathway includes 14 FANC genes, which function in ubiquitination-phosphorylation pathways and participate in repairing DNA interstrand crosslinks created by agents such as (mitomycin C) MMC or cisplatin . Little is known regarding the role of FANC in the hypoxic response. However, FANCC and FANCD2 cells exhibit increased IR sensitivity under hypoxia compared to wild-type cells [118, 130]. UBE2T is an E2 conjugating enzyme that operates in the FA pathway to mono-ubiquitinate FANCD2 and FANCI. UBE2T expression is inhibited under hypoxia by a mechanism involving decreased promoter activity, independent of HIF1α, HIF1β or HIF2α. Consistent with the FA phenotype, both anoxic and UBE2T knockdown cells are hypersensitive to MMC-induced DNA crosslinks .
Therapeutic targeting of hypoxic tumor cells
The success of anti-cancer therapies is currently challenged by increased local and systemic resistance of tumor cells residing in the hypoxic microenvironment. However, the hypoxic phenotype can also provide an opportunity to specifically target cells in the tumor microenvironment and improve the therapeutic index (e.g. kill more cancer cells than normal cells) (see Figure 4). The development of therapeutic agents that are selectively activated upon exposure to low oxygen is of great interest . For example, tirapazamine and apaziquone, both bioreductive prodrugs that induce DNA damage, have been tested in Phase III clinical trials . A newer compound, TH-302, is a 2-nitroimidazole triggered hypoxia-activated prodrug of the cytotoxin bromo-isophosphoramide mustard (Br-IPM), which causes DNA damage under hypoxic/anoxic conditions . The antitumor activity of TH-302 has been shown to be dose-dependent and decreased the hypoxic fraction in xenografts of varying histology. TH-302 also induces DNA damage (as measured by γ-H2AX) in hypoxic regions in vivo and can further kill cells through a time-dependent “bystander effect”. This compound is currently in Phase II-III clinical trials in combination with chemotherapy.
Translational control is an important contributor to the hypoxic adaptation and gene expression alongside with HIF-dependent pathways . Therefore, targeting mTOR and UPR could provide another opportunity to enhance selective tumor cell kill [32, 133, 134]. Clinically relevant agents that influence mTOR or UPR signaling include for example imatinib, nelfinavir and sunitinib, which can improve tumor oxygenation and inhibit angiogenesis [109, 135].
Synthetic lethality is a phenomenon that arises when mutations in two or more genes result in cell death, while a cell with a mutation in either gene alone is viable . Over the recent years, this has started to attract attention as a way to attack the Achilles’ heel of a cancer cell. For example, inhibition of poly(ADP-ribose) polymerase (PARP), which normally functions in single-strand break (SSB) and base-excision repair (BER), is synthetically lethal with BRCA-deficient tumors . In addition to targeting cancerous mutations, synthetic lethality based on tumor microenvironment has emerged, where the extrinsic differences of tumor cells are used to widen the therapeutic index . In this “contextual” synthetic lethality, the hypoxic phenotype with defective DNA repair can be exploited, together with inhibiting a backup DNA repair pathway, to specifically kill hypoxic cells. Therapies would therefore preferentially kill tumor cells with reduced DNA repair capacity, and spare normal tissue with physiological oxygenation state and functional DNA repair. Indeed, hypoxic HR-defective cells are sensitive to PARP inhibition [108, 138]. PARP inhibition induces DNA damage in proliferating cells and kills hypoxic cells specifically in S phase . Synthetic lethality in the HR pathway has also been documented between RAD52 and BRCA2, as well as between splicing factor proline and glutamate-rich (SFPQ)/PSF and RAD51D [139, 140]. Additionally, PTEN null astrocytes were found to be sensitive to PARP inhibition due to lower expression of Rad51B-D. However, recent data from our laboratory failed to observe a correlation between PTEN status and RAD51 function .
In MMR, inhibition of POLB in MSH2-deficient; and inhibition of POLG in MLH1-deficient cells, produces a synthetic lethal phenotype . An siRNA screen identified inhibited PTEN-induced putative kinase 1 (PINK1) as lethal in cells deficient in MLH1, MSH2 and MSH6 . Given that most HR factors and MMR are downregulated under hypoxia, determining whether these synthetic lethal interactions could be exploited to target hypoxic tumor cells, would be of great interest. Future investigations will show if these observations could have an impact on radiation- and clinical oncology.
A number of molecular mechanisms have been proposed to explain hypoxic inhibition of HR and MMR-mediated DNA repair based on biochemical and cell biology endpoints. Molecular pathways may play differing roles depending on tissue type, microenvironment conditions and proliferation status; or alternatively, each might have a relative contribution for a global DNA repair-deficient phenotype. Dissecting these pathways could help designing anti-cancer treatments that inhibit DNA repair and sensitize tumor cells to radio- and chemotherapies. Also, a better understanding of therapies targeting the proliferating hypoxic cell subpopulations could increase selective killing of resistant tumor cells. Clinical trials using these approaches will require careful assessment of the tumor microenvironment using imaging or other techniques in order to incorporate hypoxia assessment as a part of a standard of care. This approach will serve well to be one step closer to individualized cancer medicine and improved patient outcome.
Vaupel P, Harrison L: Tumor hypoxia: causative factors, compensatory mechanisms, and cellular response. Oncologist. 2004, 9 (Suppl 5): 4-9.
Hill RP, Bristow RG: The Scientific Basis of Radiotherapy. The Basic Science of Oncology. Edited by: Tannock IF, Hill RP, Bristow RG, Harrington L. 2005, New York: McGraw-Hill Ltd, 289-321.
Chan N, Koch CJ, Bristow RG: Tumor hypoxia as a modifier of DNA strand break and cross-link repair. Curr Mol Med. 2009, 9: 401-410. 10.2174/156652409788167050.
Vaupel P, Mayer A: Hypoxia in cancer: significance and impact on clinical outcome. Cancer Metastasis Rev. 2007, 26: 225-239. 10.1007/s10555-007-9055-1.
Ljungkvist AS, Bussink J, Kaanders JH, van der Kogel AJ: Dynamics of tumor hypoxia measured with bioreductive hypoxic cell markers. Radiat Res. 2007, 167: 127-145. 10.1667/RR0719.1.
Hockel M, Knoop C, Schlenger K, Vorndran B, Baussmann E, Mitze M, Knapstein PG, Vaupel P: Intratumoral pO2 predicts survival in advanced cancer of the uterine cervix. Radiother Oncol. 1993, 26: 45-50. 10.1016/0167-8140(93)90025-4.
Hockel M, Schlenger K, Aral B, Mitze M, Schaffer U, Vaupel P: Association between tumor hypoxia and malignant progression in advanced cancer of the uterine cervix. Cancer Res. 1996, 56: 4509-4515.
Fyles A, Milosevic M, Hedley D, Pintilie M, Levin W, Manchul L, Hill RP: Tumor hypoxia has independent predictor impact only in patients with node-negative cervix cancer. J Clin Oncol. 2002, 20: 680-687. 10.1200/JCO.20.3.680.
Knocke TH, Weitmann HD, Feldmann HJ, Selzer E, Potter R: Intratumoral pO2-measurements as predictive assay in the treatment of carcinoma of the uterine cervix. Radiother Oncol. 1999, 53: 99-104. 10.1016/S0167-8140(99)00139-5.
Lyng H, Sundfor K, Trope C, Rofstad EK: Disease control of uterine cervical cancer: relationships to tumor oxygen tension, vascular density, cell density, and frequency of mitosis and apoptosis measured before treatment and during radiotherapy. Clin Cancer Res. 2000, 6: 1104-1112.
Nordsmark M, Bentzen SM, Rudat V, Brizel D, Lartigau E, Stadler P, Becker A, Adam M, Molls M, Dunst J, et al: Prognostic value of tumor oxygenation in 397 head and neck tumors after primary radiation therapy. An international multi-center study. Radiother Oncol. 2005, 77: 18-24. 10.1016/j.radonc.2005.06.038.
Chan N, Bristow RG: “Contextual” synthetic lethality and/or loss of heterozygosity: tumor hypoxia and modification of DNA repair. Clin Cancer Res. 2010, 16: 4553-4560. 10.1158/1078-0432.CCR-10-0527.
Vaupel P: The role of hypoxia-induced factors in tumor progression. Oncologist. 2004, 9 (Suppl 5): 10-17.
Bristow RG, Hill RP: Hypoxia and metabolism. Hypoxia, DNA repair and genetic instability. Nat Rev Cancer. 2008, 8: 180-192. 10.1038/nrc2344.
Rofstad EK, Galappathi K, Mathiesen B, Ruud EB: Fluctuating and diffusion-limited hypoxia in hypoxia-induced metastasis. Clin Cancer Res. 2007, 13: 1971-1978. 10.1158/1078-0432.CCR-06-1967.
Hoogsteen IJ, Marres HA, van der Kogel AJ, Kaanders JH: The hypoxic tumour microenvironment, patient selection and hypoxia-modifying treatments. Clin Oncol (R Coll Radiol). 2007, 19: 385-396. 10.1016/j.clon.2007.03.001.
Papandreou I, Powell A, Lim AL, Denko N: Cellular reaction to hypoxia: sensing and responding to an adverse environment. Mutat Res. 2005, 569: 87-100. 10.1016/j.mrfmmm.2004.06.054.
Bencokova Z, Kaufmann MR, Pires IM, Lecane PS, Giaccia AJ, Hammond EM: ATM activation and signaling under hypoxic conditions. Mol Cell Biol. 2009, 29: 526-537. 10.1128/MCB.01301-08.
Freiberg RA, Hammond EM, Dorie MJ, Welford SM, Giaccia AJ: DNA damage during reoxygenation elicits a Chk2-dependent checkpoint response. Mol Cell Biol. 2006, 26: 1598-1609. 10.1128/MCB.26.5.1598-1609.2006.
Gibson SL, Bindra RS, Glazer PM: CHK2-dependent phosphorylation of BRCA1 in hypoxia. Radiat Res. 2006, 166: 646-651. 10.1667/RR0660.1.
Olcina M, Lecane PS, Hammond EM: Targeting hypoxic cells through the DNA damage response. Clin Cancer Res. 2010, 16: 5624-5629. 10.1158/1078-0432.CCR-10-0286.
Pires IM, Bencokova Z, McGurk C, Hammond EM: Exposure to acute hypoxia induces a transient DNA damage response which includes Chk1 and TLK1. Cell Cycle. 2010, 9: 2502-2507.
Subarsky P, Hill RP: The hypoxic tumour microenvironment and metastatic progression. Clin Exp Metastasis. 2003, 20: 237-250. 10.1023/A:1022939318102.
Sullivan R, Graham CH: Hypoxia-driven selection of the metastatic phenotype. Cancer Metastasis Rev. 2007, 26: 319-331. 10.1007/s10555-007-9062-2.
Chaudary N, Hill RP: Hypoxia and metastasis. Clin Cancer Res. 2007, 13: 1947-1949. 10.1158/1078-0432.CCR-06-2971.
Spiro IJ, Rice GC, Durand RE, Stickler R, Ling CC: Cell killing, radiosensitization and cell cycle redistribution induced by chronic hypoxia. Int J Radiat Oncol Biol Phys. 1984, 10: 1275-1280. 10.1016/0360-3016(84)90332-8.
Murray D, Meyn RE, Vanankeren SC: Variations in the spectrum of lesions produced in the DNA of cells from mouse tissues after exposure to gamma-rays in air-breathing or in artificially anoxic animals. Int J Radiat Biol Relat Stud Phys Chem Med. 1988, 53: 921-933. 10.1080/09553008814551291.
Zhang H, Koch CJ, Wallen CA, Wheeler KT: Radiation-induced DNA damage in tumors and normal tissues. III. Oxygen dependence of the formation of strand breaks and DNA-protein crosslinks. Radiat Res. 1995, 142: 163-168. 10.2307/3579024.
Chan N, Milosevic M, Bristow RG: Tumor hypoxia, DNA repair and prostate cancer progression: new targets and new therapies. Future Oncol. 2007, 3: 329-341. 10.2217/147966188.8.131.529.
Overgaard J: Hypoxic radiosensitization: adored and ignored. J Clin Oncol. 2007, 25: 4066-4074. 10.1200/JCO.2007.12.7878.
Semenza GL: Hypoxia-inducible factors in physiology and medicine. Cell. 2012, 148: 399-408. 10.1016/j.cell.2012.01.021.
Wilson WR, Hay MP: Targeting hypoxia in cancer therapy. Nat Rev Cancer. 2011, 11: 393-410. 10.1038/nrc3064.
Camps C, Buffa FM, Colella S, Moore J, Sotiriou C, Sheldon H, Harris AL, Gleadle JM, Ragoussis J: hsa-miR-210 Is induced by hypoxia and is an independent prognostic factor in breast cancer. Clin Cancer Res. 2008, 14: 1340-1348. 10.1158/1078-0432.CCR-07-1755.
Fu L, Wang G, Shevchuk MM, Nanus DM, Gudas LJ: Generation of a mouse model of Von Hippel-Lindau kidney disease leading to renal cancers by expression of a constitutively active mutant of HIF1alpha. Cancer Res. 2011, 71: 6848-6856. 10.1158/0008-5472.CAN-11-1745.
Yoo YG, Christensen J, Huang LE: HIF-1alpha confers aggressive malignant traits on human tumor cells independent of its canonical transcriptional function. Cancer Res. 2011, 71: 1244-1252. 10.1158/0008-5472.CAN-10-2360.
Nakada C, Tsukamoto Y, Matsuura K, Nguyen TL, Hijiya N, Uchida T, Sato F, Mimata H, Seto M, Moriyama M: Overexpression of miR-210, a downstream target of HIF1alpha, causes centrosome amplification in renal carcinoma cells. J Pathol. 2011, 224: 280-288. 10.1002/path.2860.
Doe MR, Ascano JM, Kaur M, Cole MD: Myc Posttranscriptionally Induces HIF1 Protein and Target Gene Expression in Normal and Cancer Cells. Cancer Res. 2012, 72: 949-957. 10.1158/0008-5472.CAN-11-2371.
Pires IM, Bencokova Z, Milani M, Folkes LK, Li JL, Stratford MR, Harris AL, Hammond EM: Effects of acute versus chronic hypoxia on DNA damage responses and genomic instability. Cancer Res. 2010, 70: 925-935. 10.1158/0008-5472.CAN-09-2715.
Zafarana G, Ishkanian AS, Malloff CA, Locke JA, Sykes J, Thoms J, Lam WL, Squire JA, Yoshimoto M, Ramnarine VR, et al: Copy number alterations of c-MYC and PTEN are prognostic factors for relapse after prostate cancer radiotherapy. Cancer. 2012, 118: 4053-4062. 10.1002/cncr.26729.
Huang LE, Bindra RS, Glazer PM, Harris AL: Hypoxia-induced genetic instability–a calculated mechanism underlying tumor progression. J Mol Med. 2007, 85: 139-148. 10.1007/s00109-006-0133-6.
Hammond EM, Dorie MJ, Giaccia AJ: ATR/ATM targets are phosphorylated by ATR in response to hypoxia and ATM in response to reoxygenation. J Biol Chem. 2003, 278: 12207-12213. 10.1074/jbc.M212360200.
Hsieh CH, Shyu WC, Chiang CY, Kuo JW, Shen WC, Liu RS: NADPH oxidase subunit 4-mediated reactive oxygen species contribute to cycling hypoxia-promoted tumor progression in glioblastoma multiforme. PLoS One. 2011, 6: e23945-10.1371/journal.pone.0023945.
O”Driscoll M, Jeggo PA: The role of double-strand break repair - insights from human genetics. Nat Rev Genet. 2006, 7: 45-54.
Shimada M, Nakanishi M: DNA damage checkpoints and cancer. J Mol Histol. 2006, 37: 253-260. 10.1007/s10735-006-9039-4.
Li L, Zou L: Sensing, signaling, and responding to DNA damage: organization of the checkpoint pathways in mammalian cells. J Cell Biochem. 2005, 94: 298-306. 10.1002/jcb.20355.
Hammond EM, Denko NC, Dorie MJ, Abraham RT, Giaccia AJ: Hypoxia links ATR and p53 through replication arrest. Mol Cell Biol. 2002, 22: 1834-1843. 10.1128/MCB.22.6.1834-1843.2002.
Gibson SL, Bindra RS, Glazer PM: Hypoxia-induced phosphorylation of Chk2 in an ataxia telangiectasia mutated-dependent manner. Cancer Res. 2005, 65: 10734-10741. 10.1158/0008-5472.CAN-05-1160.
Freiberg RA, Krieg AJ, Giaccia AJ, Hammond EM: Checking in on hypoxia/reoxygenation. Cell Cycle. 2006, 5: 1304-1307. 10.4161/cc.5.12.2811.
Bouquet F, Ousset M, Biard D, Fallone F, Dauvillier S, Frit P, Salles B, Muller C: A DNA-dependent stress response involving DNA-PK occurs in hypoxic cells and contributes to cellular adaptation to hypoxia. J Cell Sci. 2011, 124: 1943-1951. 10.1242/jcs.078030.
Harding SM, Coackley C, Bristow RG: ATM-dependent phosphorylation of 53BP1 in response to genomic stress in oxic and hypoxic cells. Radiother Oncol. 2011, 99: 307-312. 10.1016/j.radonc.2011.05.039.
Kim BM, Choi JY, Kim YJ, Woo HD, Chung HW: Reoxygenation following hypoxia activates DNA-damage checkpoint signaling pathways that suppress cell-cycle progression in cultured human lymphocytes. FEBS Lett. 2007, 581: 3005-3012. 10.1016/j.febslet.2007.05.053.
Gardner LB, Li Q, Park MS, Flanagan WM, Semenza GL, Dang CV: Hypoxia inhibits G1/S transition through regulation of p27 expression. J Biol Chem. 2001, 276: 7919-7926. 10.1074/jbc.M010189200.
Gardner LB, Li F, Yang X, Dang CV: Anoxic fibroblasts activate a replication checkpoint that is bypassed by E1a. Mol Cell Biol. 2003, 23: 9032-9045. 10.1128/MCB.23.24.9032-9045.2003.
Wang L, Gao J, Dai W, Lu L: Activation of Polo-like kinase 3 by hypoxic stresses. J Biol Chem. 2008, 283: 25928-25935. 10.1074/jbc.M801326200.
Tan C, Zhang LY, Chen H, Xiao L, Liu XP, Zhang JX: Overexpression of the human ubiquitin E3 ligase CUL4A alleviates hypoxia-reoxygenation injury in pheochromocytoma (PC12) cells. Biochem Biophys Res Commun. 2011, 416: 403-408. 10.1016/j.bbrc.2011.11.054.
Chan N, Koritzinsky M, Zhao H, Bindra R, Glazer PM, Powell S, Belmaaza A, Wouters B, Bristow RG: Chronic hypoxia decreases synthesis of homologous recombination proteins to offset chemoresistance and radioresistance. Cancer Res. 2008, 68: 605-614. 10.1158/0008-5472.CAN-07-5472.
Hubbi ME, Kshitiz , Gilkes DM, Rey S, Wong CC, Luo W, Kim DH, Dang CV, Levchenko A, Semenza GL: A nontranscriptional role for HIF-1alpha as a direct inhibitor of DNA replication. Sci Signal. 2013, 6: ra10-10.1126/scisignal.2003417.
Hubbi ME, Luo W, Baek JH, Semenza GL: MCM proteins are negative regulators of hypoxia-inducible factor 1. Mol Cell. 2011, 42: 700-712. 10.1016/j.molcel.2011.03.029.
Papp-Szabo E, Josephy PD, Coomber BL: Microenvironmental influences on mutagenesis in mammary epithelial cells. Int J Cancer. 2005, 116: 679-685. 10.1002/ijc.21088.
Keysar SB, Trncic N, Larue SM, Fox MH: Hypoxia/reoxygenation-induced mutations in mammalian cells detected by the flow cytometry mutation assay and characterized by mutant spectrum. Radiat Res. 2010, 173: 21-26. 10.1667/RR1838.1.
Reynolds TY, Rockwell S, Glazer PM: Genetic instability induced by the tumor microenvironment. Cancer Res. 1996, 56: 5754-5757.
Li CY, Little JB, Hu K, Zhang W, Zhang L, Dewhirst MW, Huang Q: Persistent genetic instability in cancer cells induced by non-DNA-damaging stress exposures. Cancer Res. 2001, 61: 428-432.
Michor F, Iwasa Y, Vogelstein B, Lengauer C, Nowak MA: Can chromosomal instability initiate tumorigenesis?. Semin Cancer Biol. 2005, 15: 43-49. 10.1016/j.semcancer.2004.09.007.
Geiersbach KB, Samowitz WS: Microsatellite instability and colorectal cancer. Arch Pathol Lab Med. 2011, 135: 1269-1277. 10.5858/arpa.2011-0035-RA.
Shahrzad S, Quayle L, Stone C, Plumb C, Shirasawa S, Rak JW, Coomber BL: Ischemia-induced K-ras mutations in human colorectal cancer cells: role of microenvironmental regulation of MSH2 expression. Cancer Res. 2005, 65: 8134-8141. 10.1158/0008-5472.CAN-05-0713.
Edwards RA, Witherspoon M, Wang K, Afrasiabi K, Pham T, Birnbaumer L, Lipkin SM: Epigenetic repression of DNA mismatch repair by inflammation and hypoxia in inflammatory bowel disease-associated colorectal cancer. Cancer Res. 2009, 69: 6423-6429. 10.1158/0008-5472.CAN-09-1285.
Kondo A, Safaei R, Mishima M, Niedner H, Lin X, Howell SB: Hypoxia-induced enrichment and mutagenesis of cells that have lost DNA mismatch repair. Cancer Res. 2001, 61: 7603-7607.
Furlan D, Sahnane N, Carnevali I, Cerutti R, Bertoni F, Kwee I, Uccella S, Bertolini V, Chiaravalli AM, Capella C: Up-regulation of the hypoxia-inducible factor-1 transcriptional pathway in colorectal carcinomas. Hum Pathol. 2008, 39: 1483-1494. 10.1016/j.humpath.2008.02.013.
Lehtonen HJ, Makinen MJ, Kiuru M, Laiho P, Herva R, van Minderhout I, Hogendoorn PC, Cornelisse C, Devilee P, Launonen V, Aaltonen LA: Increased HIF1 alpha in SDH and FH deficient tumors does not cause microsatellite instability. Int J Cancer. 2007, 121: 1386-1389. 10.1002/ijc.22819.
Rice GC, Hoy C, Schimke RT: Transient hypoxia enhances the frequency of dihydrofolate reductase gene amplification in Chinese hamster ovary cells. Proc Natl Acad Sci U S A. 1986, 83: 5978-5982. 10.1073/pnas.83.16.5978.
Young SD, Marshall RS, Hill RP: Hypoxia induces DNA overreplication and enhances metastatic potential of murine tumor cells. Proc Natl Acad Sci U S A. 1988, 85: 9533-9537. 10.1073/pnas.85.24.9533.
Rofstad EK, Johnsen NM, Lyng H: Hypoxia-induced tetraploidisation of a diploid human melanoma cell line in vitro. Br J Cancer Suppl. 1996, 27: S136-S139.
Coquelle A, Toledo F, Stern S, Bieth A, Debatisse M: A new role for hypoxia in tumor progression: induction of fragile site triggering genomic rearrangements and formation of complex DMs and HSRs. Mol Cell. 1998, 2: 259-265. 10.1016/S1097-2765(00)80137-9.
Yuan J, Narayanan L, Rockwell S, Glazer PM: Diminished DNA repair and elevated mutagenesis in mammalian cells exposed to hypoxia and low pH. Cancer Res. 2000, 60: 4372-4376.
Coquelle A, Rozier L, Dutrillaux B, Debatisse M: Induction of multiple double-strand breaks within an hsr by meganucleaseI-SceI expression or fragile site activation leads to formation of double minutes and other chromosomal rearrangements. Oncogene. 2002, 21: 7671-7679. 10.1038/sj.onc.1205880.
Mihaylova VT, Bindra RS, Yuan J, Campisi D, Narayanan L, Jensen R, Giordano F, Johnson RS, Rockwell S, Glazer PM: Decreased expression of the DNA mismatch repair gene Mlh1 under hypoxic stress in mammalian cells. Mol Cell Biol. 2003, 23: 3265-3273. 10.1128/MCB.23.9.3265-3273.2003.
Banath JP, Sinnott L, Larrivee B, MacPhail SH, Olive PL: Growth of V79 cells as xenograft tumors promotes multicellular resistance but does not increase spontaneous or radiation-induced mutant frequency. Radiat Res. 2005, 164: 733-744. 10.1667/3474.1.
Koshiji M, To KK, Hammer S, Kumamoto K, Harris AL, Modrich P, Huang LE: HIF-1alpha induces genetic instability by transcriptionally downregulating MutSalpha expression. Mol Cell. 2005, 17: 793-803. 10.1016/j.molcel.2005.02.015.
Fischer U, Radermacher J, Mayer J, Mehraein Y, Meese E: Tumor hypoxia: impact on gene amplification in glioblastoma. Int J Oncol. 2008, 33: 509-515.
Rodriguez-Jimenez FJ, Moreno-Manzano V, Lucas-Dominguez R, Sanchez-Puelles JM: Hypoxia causes downregulation of mismatch repair system and genomic instability in stem cells. Stem Cells. 2008, 26: 2052-2062. 10.1634/stemcells.2007-1016.
Lee JH, Choi IJ, Song DK, Kim DK: Genetic instability in the human lymphocyte exposed to hypoxia. Cancer Genet Cytogenet. 2010, 196: 83-88. 10.1016/j.cancergencyto.2009.09.002.
Kumareswaran R, Ludkovski O, Meng A, Sykes J, Pintilie M, Bristow RG: Chronic hypoxia compromises repair of DNA double-strand breaks to drive genetic instability. J Cell Sci. 2012, 125: 189-199. 10.1242/jcs.092262.
Mondello C, Smirnova A, Giulotto E: Gene amplification, radiation sensitivity and DNA double-strand breaks. Mutat Res. 2010, 704: 29-37. 10.1016/j.mrrev.2010.01.008.
Popp HD, Bohlander SK: Genetic instability in inherited and sporadic leukemias. Genes Chromosomes Cancer. 2010, 49: 1071-1081. 10.1002/gcc.20823.
Patel KJ, Yu VP, Lee H, Corcoran A, Thistlethwaite FC, Evans MJ, Colledge WH, Friedman LS, Ponder BA, Venkitaraman AR: Involvement of Brca2 in DNA repair. Mol Cell. 1998, 1: 347-357. 10.1016/S1097-2765(00)80035-0.
Yu VP, Koehler M, Steinlein C, Schmid M, Hanakahi LA, van Gool AJ, West SC, Venkitaraman AR: Gross chromosomal rearrangements and genetic exchange between nonhomologous chromosomes following BRCA2 inactivation. Genes Dev. 2000, 14: 1400-1406.
Venkitaraman AR: Linking the cellular functions of BRCA genes to cancer pathogenesis and treatment. Annu Rev Pathol. 2009, 4: 461-487. 10.1146/annurev.pathol.3.121806.151422.
Walsh CS, Ogawa S, Scoles DR, Miller CW, Kawamata N, Narod SA, Koeffler HP, Karlan BY: Genome-wide loss of heterozygosity and uniparental disomy in BRCA1/2-associated ovarian carcinomas. Clin Cancer Res. 2008, 14: 7645-7651. 10.1158/1078-0432.CCR-08-1291.
Min J, Choi ES, Hwang K, Kim J, Sampath S, Venkitaraman AR, Lee H: The Breast Cancer Susceptibility Gene BRCA2 Is Required for the Maintenance of Telomere Homeostasis. J Biol Chem. 2012, 287: 5091-5101. 10.1074/jbc.M111.278994.
Johnson AB, Barton MC: Hypoxia-induced and stress-specific changes in chromatin structure and function. Mutat Res. 2007, 618: 149-162. 10.1016/j.mrfmmm.2006.10.007.
Arlt MF, Durkin SG, Ragland RL, Glover TW: Common fragile sites as targets for chromosome rearrangements. DNA Repair (Amst). 2006, 5: 1126-1135. 10.1016/j.dnarep.2006.05.010.
Schwartz M, Zlotorynski E, Goldberg M, Ozeri E, Rahat A, le Sage C, Chen BP, Chen DJ, Agami R, Kerem B: Homologous recombination and nonhomologous end-joining repair pathways regulate fragile site stability. Genes Dev. 2005, 19: 2715-2726. 10.1101/gad.340905.
Ozeri-Galai E, Schwartz M, Rahat A, Kerem B: Interplay between ATM and ATR in the regulation of common fragile site stability. Oncogene. 2008, 27: 2109-2117. 10.1038/sj.onc.1210849.
Tanaka H, Yao MC: Palindromic gene amplification–an evolutionarily conserved role for DNA inverted repeats in the genome. Nat Rev Cancer. 2009, 9: 216-224. 10.1038/nrc2591.
Wilson DM, Thompson LH: Molecular mechanisms of sister-chromatid exchange. Mutat Res. 2007, 616: 11-23. 10.1016/j.mrfmmm.2006.11.017.
Avidor-Reiss T, Gopalakrishnan J: Building a centriole. Curr Opin Cell Biol. 2013, 25: 72-77. 10.1016/j.ceb.2012.10.016.
Chan JY: A clinical overview of centrosome amplification in human cancers. Int J Biol Sci. 2011, 7: 1122-1144.
Duijf PH, Benezra R: The cancer biology of whole-chromosome instability. Oncogene. 2013, 32: 4727-4736. 10.1038/onc.2012.616.
Moser SC, Bensaddek D, Ortmann B, Maure JF, Mudie S, Blow JJ, Lamond AI, Swedlow JR, Rocha S: PHD1 Links Cell-Cycle Progression to Oxygen Sensing through Hydroxylation of the Centrosomal Protein Cep192. Dev Cell. 2013, 26: 381-392. 10.1016/j.devcel.2013.06.014.
Bristow RG, Ozcelik H, Jalali F, Chan N, Vesprini D: Homologous recombination and prostate cancer: a model for novel DNA repair targets and therapies. Radiother Oncol. 2007, 83: 220-230. 10.1016/j.radonc.2007.04.016.
Meng AX, Jalali F, Cuddihy A, Chan N, Bindra RS, Glazer PM, Bristow RG: Hypoxia down-regulates DNA double strand break repair gene expression in prostate cancer cells. Radiother Oncol. 2005, 76: 168-176. 10.1016/j.radonc.2005.06.025.
Koshiji M, Kageyama Y, Pete EA, Horikawa I, Barrett JC, Huang LE: HIF-1alpha induces cell cycle arrest by functionally counteracting Myc. EMBO J. 2004, 23: 1949-1956. 10.1038/sj.emboj.7600196.
To KK, Sedelnikova OA, Samons M, Bonner WM, Huang LE: The phosphorylation status of PAS-B distinguishes HIF-1alpha from HIF-2alpha in NBS1 repression. EMBO J. 2006, 25: 4784-4794. 10.1038/sj.emboj.7601369.
Hayashi M, Yoo YY, Christensen J, Huang LE: Requirement of evading apoptosis for HIF-1alpha-induced malignant progression in mouse cells. Cell Cycle. 2011, 10: 2364-2372. 10.4161/cc.10.14.16313.
Bindra RS, Schaffer PJ, Meng A, Woo J, Maseide K, Roth ME, Lizardi P, Hedley DW, Bristow RG, Glazer PM: Down-regulation of Rad51 and decreased homologous recombination in hypoxic cancer cells. Mol Cell Biol. 2004, 24: 8504-8518. 10.1128/MCB.24.19.8504-8518.2004.
Bindra RS, Schaffer PJ, Meng A, Woo J, Maseide K, Roth ME, Lizardi P, Hedley DW, Bristow RG, Glazer PM: Alterations in DNA repair gene expression under hypoxia: elucidating the mechanisms of hypoxia-induced genetic instability. Ann N Y Acad Sci. 2005, 1059: 184-195. 10.1196/annals.1339.049.
Bindra RS, Glazer PM: Co-repression of mismatch repair gene expression by hypoxia in cancer cells: role of the Myc/Max network. Cancer Lett. 2007, 252: 93-103. 10.1016/j.canlet.2006.12.011.
Chan N, Pires IM, Bencokova Z, Coackley C, Luoto KR, Bhogal N, Lakshman M, Gottipati P, Oliver FJ, Helleday T, et al: Contextual synthetic lethality of cancer cell kill based on the tumor microenvironment. Cancer Res. 2010, 70: 8045-8054. 10.1158/0008-5472.CAN-10-2352.
Wouters BG, Koritzinsky M: Hypoxia signalling through mTOR and the unfolded protein response in cancer. Nat Rev Cancer. 2008, 8: 851-864. 10.1038/nrc2501.
Lu Y, Chu A, Turker MS, Glazer PM: Hypoxia-Induced Epigenetic Regulation and Silencing of the BRCA1 Promoter. Mol Cell Biol. 2011, 31: 3339-3350. 10.1128/MCB.01121-10.
Crosby ME, Kulshreshtha R, Ivan M, Glazer PM: MicroRNA regulation of DNA repair gene expression in hypoxic stress. Cancer Res. 2009, 69: 1221-1229. 10.1158/0008-5472.CAN-08-2516.
Chang CJ, Yang JY, Xia W, Chen CT, Xie X, Chao CH, Woodward WA, Hsu JM, Hortobagyi GN, Hung MC: EZH2 promotes expansion of breast tumor initiating cells through activation of RAF1-beta-catenin signaling. Cancer Cell. 2011, 19: 86-100. 10.1016/j.ccr.2010.10.035.
Cao P, Deng Z, Wan M, Huang W, Cramer SD, Xu J, Lei M, Sui G: MicroRNA-101 negatively regulates Ezh2 and its expression is modulated by androgen receptor and HIF-1alpha/HIF-1beta. Mol Cancer. 2010, 9: 108-10.1186/1476-4598-9-108.
Tsuchimoto T, Sakata K, Someya M, Yamamoto H, Hirayama R, Matsumoto Y, Furusawa Y, Hareyama M: Gene expression associated with DNA-dependent protein kinase activity under normoxia, hypoxia, and reoxygenation. J Radiat Res. 2011, 52: 464-471. 10.1269/jrr.10137.
Wirthner R, Wrann S, Balamurugan K, Wenger RH, Stiehl DP: Impaired DNA double-strand break repair contributes to chemoresistance in HIF-1 alpha-deficient mouse embryonic fibroblasts. Carcinogenesis. 2008, 29: 2306-2316. 10.1093/carcin/bgn231.
Lara PC, Lloret M, Clavo B, Apolinario RM, Bordon E, Rey A, Falcon O, Alonso AR, Belka C: Hypoxia downregulates Ku70/80 expression in cervical carcinoma tumors. Radiother Oncol. 2008, 89: 222-226. 10.1016/j.radonc.2008.07.018.
He F, Li L, Kim D, Wen B, Deng X, Gutin PH, Ling CC, Li GC: Adenovirus-mediated expression of a dominant negative Ku70 fragment radiosensitizes human tumor cells under aerobic and hypoxic conditions. Cancer Res. 2007, 67: 634-642. 10.1158/0008-5472.CAN-06-1860.
Sprong D, Janssen HL, Vens C, Begg AC: Resistance of hypoxic cells to ionizing radiation is influenced by homologous recombination status. Int J Radiat Oncol Biol Phys. 2006, 64: 562-572. 10.1016/j.ijrobp.2005.09.031.
Bindra RS, Gibson SL, Meng A, Westermark U, Jasin M, Pierce AJ, Bristow RG, Classon MK, Glazer PM: Hypoxia-induced down-regulation of BRCA1 expression by E2Fs. Cancer Res. 2005, 65: 11597-11604. 10.1158/0008-5472.CAN-05-2119.
Madan E, Gogna R, Pati U: p53Ser15 Phosphorylation disrupts p53-RPA70 complex and induces RPA70-mediated DNA repair in hypoxia. Biochem J. 2012, 443: 811-820. 10.1042/BJ20111627.
Hoffelder DR, Luo L, Burke NA, Watkins SC, Gollin SM, Saunders WS: Resolution of anaphase bridges in cancer cells. Chromosoma. 2004, 112: 389-397.
Wimmer K, Etzler J: Constitutional mismatch repair-deficiency syndrome: have we so far seen only the tip of an iceberg?. Hum Genet. 2008, 124: 105-122. 10.1007/s00439-008-0542-4.
Li J, Koike J, Kugoh H, Arita M, Ohhira T, Kikuchi Y, Funahashi K, Takamatsu K, Boland CR, Koi M, Hemmi H: Down-regulation of MutS homolog 3 by hypoxia in human colorectal cancer. Biochim Biophys Acta. 2012, 1823: 889-899. 10.1016/j.bbamcr.2012.01.017.
Grandori C, Cowley SM, James LP, Eisenman RN: The Myc/Max/Mad network and the transcriptional control of cell behavior. Annu Rev Cell Dev Biol. 2000, 16: 653-699. 10.1146/annurev.cellbio.16.1.653.
Nakamura H, Tanimoto K, Hiyama K, Yunokawa M, Kawamoto T, Kato Y, Yoshiga K, Poellinger L, Hiyama E, Nishiyama M: Human mismatch repair gene, MLH1, is transcriptionally repressed by the hypoxia-inducible transcription factors, DEC1 and DEC2. Oncogene. 2008, 27: 4200-4209. 10.1038/onc.2008.58.
Nouspikel T: DNA repair in mammalian cells : Nucleotide excision repair: variations on versatility. Cell Mol Life Sci. 2009, 66: 994-1009. 10.1007/s00018-009-8737-y.
Rezvani HR, Mahfouf W, Ali N, Chemin C, Ged C, Kim AL, de Verneuil H, Taieb A, Bickers DR, Mazurier F: Hypoxia-inducible factor-1alpha regulates the expression of nucleotide excision repair proteins in keratinocytes. Nucleic Acids Res. 2010, 38: 797-809. 10.1093/nar/gkp1072.
Filippi S, Latini P, Frontini M, Palitti F, Egly JM, Proietti-De-Santis L: CSB protein is (a direct target of HIF-1 and) a critical mediator of the hypoxic response. EMBO J. 2008, 27: 2545-2556. 10.1038/emboj.2008.180.
Kitao H, Takata M: Fanconi anemia: a disorder defective in the DNA damage response. Int J Hematol. 2011, 93: 417-424. 10.1007/s12185-011-0777-z.
Kuhnert VM, Kachnic LA, Li L, Purschke M, Gheorghiu L, Lee R, Held KD, Willers H: FANCD2-deficient human fibroblasts are hypersensitive to ionising radiation at oxygen concentrations of 0% and 3% but not under normoxic conditions. Int J Radiat Biol. 2009, 85: 523-531. 10.1080/09553000902883810.
Ramaekers CH, van den Beucken T, Meng A, Kassam S, Thoms J, Bristow RG, Wouters BG: Hypoxia disrupts the Fanconi anemia pathway and sensitizes cells to chemotherapy through regulation of UBE2T. Radiother Oncol. 2011, 101: 190-197. 10.1016/j.radonc.2011.05.059.
Sun JD, Liu Q, Wang J, Ahluwalia D, Ferraro D, Wang Y, Duan JX, Ammons WS, Curd JG, Matteucci MD, Hart CP: Selective tumor hypoxia targeting by hypoxia-activated prodrug TH-302 inhibits tumor growth in preclinical models of cancer. Clin Cancer Res. 2012, 18: 758-770. 10.1158/1078-0432.CCR-11-1980.
van den Beucken T, Magagnin MG, Jutten B, Seigneuric R, Lambin P, Koritzinsky M, Wouters BG: Translational control is a major contributor to hypoxia induced gene expression. Radiother Oncol. 2011, 99: 379-384. 10.1016/j.radonc.2011.05.058.
Zhao H, Luoto KR, Meng AX, Bristow RG: The receptor tyrosine kinase inhibitor amuvatinib (MP470) sensitizes tumor cells to radio- and chemo-therapies in part by inhibiting homologous recombination. Radiother Oncol. 2011, 101: 59-65. 10.1016/j.radonc.2011.08.013.
Matsumoto S, Batra S, Saito K, Yasui H, Choudhuri R, Gadisetti C, Subramanian S, Devasahayam N, Munasinghe JP, Mitchell JB, Krishna MC: Antiangiogenic agent sunitinib transiently increases tumor oxygenation and suppresses cycling hypoxia. Cancer Res. 2011, 71: 6350-6359. 10.1158/0008-5472.CAN-11-2025.
Kaelin WG: The concept of synthetic lethality in the context of anticancer therapy. Nat Rev Cancer. 2005, 5: 689-698. 10.1038/nrc1691.
Chalmers AJ, Lakshman M, Chan N, Bristow RG: Poly(ADP-ribose) polymerase inhibition as a model for synthetic lethality in developing radiation oncology targets. Semin Radiat Oncol. 2010, 20: 274-281. 10.1016/j.semradonc.2010.06.001.
Hegan DC, Lu Y, Stachelek GC, Crosby ME, Bindra RS, Glazer PM: Inhibition of poly(ADP-ribose) polymerase down-regulates BRCA1 and RAD51 in a pathway mediated by E2F4 and p130. Proc Natl Acad Sci U S A. 2010, 107: 2201-2206. 10.1073/pnas.0904783107.
Rajesh C, Baker DK, Pierce AJ, Pittman DL: The splicing-factor related protein SFPQ/PSF interacts with RAD51D and is necessary for homology-directed repair and sister chromatid cohesion. Nucleic Acids Res. 2011, 39: 132-145. 10.1093/nar/gkq738.
Feng Z, Scott SP, Bussen W, Sharma GG, Guo G, Pandita TK, Powell SN: Rad52 inactivation is synthetically lethal with BRCA2 deficiency. Proc Natl Acad Sci U S A. 2011, 108: 686-691. 10.1073/pnas.1010959107.
McEllin B, Camacho CV, Mukherjee B, Hahm B, Tomimatsu N, Bachoo RM, Burma S: PTEN loss compromises homologous recombination repair in astrocytes: implications for glioblastoma therapy with temozolomide or poly(ADP-ribose) polymerase inhibitors. Cancer Res. 2010, 70: 5457-5464. 10.1158/0008-5472.CAN-09-4295.
Fraser M, Zhao H, Luoto KR, Lundin C, Coackley C, Chan N, Joshua AM, Bismar TA, Evans A, Helleday T, Bristow RG: PTEN deletion in prostate cancer cells does not associate with loss of RAD51 function: implications for radiotherapy and chemotherapy. Clin Cancer Res. 2012, 18: 1015-1027. 10.1158/1078-0432.CCR-11-2189.
Martin SA, McCabe N, Mullarkey M, Cummins R, Burgess DJ, Nakabeppu Y, Oka S, Kay E, Lord CJ, Ashworth A: DNA polymerases as potential therapeutic targets for cancers deficient in the DNA mismatch repair proteins MSH2 or MLH1. Cancer Cell. 2010, 17: 235-248. 10.1016/j.ccr.2009.12.046.
Martin SA, Hewish M, Sims D, Lord CJ, Ashworth A: Parallel high-throughput RNA interference screens identify PINK1 as a potential therapeutic target for the treatment of DNA mismatch repair-deficient cancers. Cancer Res. 2011, 71: 1836-1848. 10.1158/0008-5472.CAN-10-2836.
This work is supported by grants from the Terry Fox Foundation-CCSRI Hypoxia PMH Program Grant, Prostate Cancer Canada (CPC-GENE project with monies from the MOVEMBER Foundation) and also, in part, by the Ontario Ministry of Health and Long Term Care. The views expressed do not necessarily reflect those of the Ontario Ministry of Health and Long Term Care. RGB is a Canadian Cancer Society Research Scientist.
The authors declare that they have no competing interests.
KRL, RK and RGB wrote the manuscript. All authors read and approved the final manuscript.
Kaisa R Luoto, Ramya Kumareswaran contributed equally to this work.