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Table 1 List of some selected genes that contain the IS2 element.

From: Eukaryotic gene invasion by a bacterial mobile insertion sequence element IS2 during cloning into a plasmid vector

Gene name and ID

Locationa

Surrounding IS2 sequencesb

dbj|AP009048.1| Escherichia coli W3110, complete genome, Length = 4646332

3742928-3744271

2320789-2322130

381819-380478

2071073-2072413

4504197-4502855

1105615-1106957

1302369-1301034

1469618-1470959

2995017-2996347

3186087-3184747

1653272-1652545

GAAAT TGG...TCT AGAAATTGG

GATCG TGG...TCT AGATCGT

GTAAT TGG...TCT AGTAATT

GTGGC TGG...TCT AGTGGC

ACAAGG TGG...TCT ACAAGG

AACCCT TGT...TCT AACCCT

TAATATC TGT...TCT AATATC

GAACCC TGT...TCT AAACCC

tttat TGG...TCT aaacttg

ATAAC TGG...TCT AATAAC

acctg TGG ... T tcgtc

dbj|AP008210.1| Oryza sativa, chromosome 4, Length = 35498469

27366872-27368214 11718374-11719715 13525525-13524204

AGAAAG TGG...TCT AGAAAG GTTAG TGG...TCT AGTTAGT AGAGAT TGG...TCT AGAGATT

emb|AL731613.5|OSJN00257Oryza sativa, chromosome 4, Length = 133967

18027-19368

AGAAAG TGG ... TCT AGAAAG

gb|AC004776.1| Homo sapiens, chromosome 5, Length = 89626

20138-18796

ATTTCC TGG...TCT ATTTCCT

gb|AC018501.9| Homo sapiens, chromosome 3, Length = 202070

72232-70890

TATCTGG TGG...TCT ATCTGG

gb|AC170856.2| Medicago truncatula, chromosome 2, Length = 101215

69921-68580

TCAAG TGG...TCT ATCAAGT

gb|AC191971.14| Rhesus Macaque, genomic DNA, Length = 174949

169869-171210

ACACAG TGG...TCT ACACAG

gb|AC202613.6| Rhesus macaque, genomic DNA, Length = 181783

146766-145426

GTTCC TGG...TCT AGTTCC

gb|AC200594.3| Rhesus macaque, genomic DNA, Length = 171745

99933-98589

TAGGTGTT TGG...TCT AGTGTTT

gb|AC198308.7| Rhesus Macaque, genomic DNA, Length = 143534

76175-74834

GTTTG TGG...TCT AGTTTGT

gb|AC196863.3| Macaca mulatta, chromosome 2, Length = 172779

155658-154318

CAAAC TGG...TCT ACAAAC

gb|AC193812.4| Canis Familiaris, chromosome 13, Length = 196541

31412-30070

TAGATCT TGG...TCT AGATCT

gb|AC187015.8| Canis familiaris, chromosome 33, Length = 215278

178002-176660

TAGTTGG TGG...TCT AGTTGG

dbj|AK229126.1| Arabidopsis thaliana, cDNA, Length = 4564

2374-3716

AAAGAG TGG...TCT AAAGAGT

dbj|AK229400.1| Arabidopsis thaliana, cDNA, Length = 3239

869-2210

AGAAGG TGG...TCT AGAAGG

gb|AY064986.1| Arabidopsis thaliana, cDNA, Length = 3309

1180-2523

TAGAAGG TGG...TCT AGAAGGT

dbj|AK226701.1| Arabidopsis thaliana, cDNA, Length = 5499

3369-2028

AGAATT TGG...TCT AGAATT

gb|AC193907.3| Pan troglodytes, chromosome x, Length = 161221

90423-91765

AGCAGG TGG...TCT AGCAGGT

  1. aThe location and the duplicated nucleotides bsurrounding IS2 sequences are shown. The underlined sequences are the first and last triplet nucleotides of the IS2 element.